Add Flask web UI, Docker Compose, core engine + tests

- physcom core: CLI, 5-pass pipeline, SQLite repo, 37 tests
- physcom_web: Flask app with HTMX for entity/domain/pipeline/results CRUD
- Docker Compose: web + cli services sharing a named volume for the DB
- Clean up local settings to use wildcard permissions

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

src/physcom_web/templates/pipeline/run.html

@@ -0,0 +1,60 @@
+{% extends "base.html" %}
+{% block title %}Run Pipeline — PhysCom{% endblock %}
+
+{% block content %}
+<h1>Run Pipeline</h1>
+
+<div class="card">
+  <form method="post" action="{{ url_for('pipeline.pipeline_run') }}">
+    <div class="form-group">
+      <label for="domain">Domain</label>
+      <select name="domain" id="domain" required>
+        <option value="">— select —</option>
+        {% for d in domains %}
+        <option value="{{ d.name }}">{{ d.name }} — {{ d.description }}</option>
+        {% endfor %}
+      </select>
+    </div>
+
+    <fieldset>
+      <legend>Passes</legend>
+      <div class="checkbox-row">
+        {% for p in [1, 2, 3, 4, 5] %}
+        <label>
+          <input type="checkbox" name="passes" value="{{ p }}"
+                 {{ 'checked' if p <= 3 }}>
+          Pass {{ p }}
+          {% if p == 1 %}(Constraints)
+          {% elif p == 2 %}(Estimation)
+          {% elif p == 3 %}(Scoring)
+          {% elif p == 4 %}(LLM Review)
+          {% elif p == 5 %}(Human Review)
+          {% endif %}
+        </label>
+        {% endfor %}
+      </div>
+    </fieldset>
+
+    <div class="form-group">
+      <label for="threshold">Score Threshold</label>
+      <input type="number" name="threshold" id="threshold" value="0.1" step="0.01" min="0" max="1">
+    </div>
+
+    <fieldset>
+      <legend>Dimensions</legend>
+      <div class="checkbox-row">
+        {% for d in dimensions %}
+        <label>
+          <input type="checkbox" name="dimensions" value="{{ d.name }}" checked>
+          {{ d.name }}
+        </label>
+        {% endfor %}
+      </div>
+    </fieldset>
+
+    <div class="form-actions">
+      <button type="submit" class="btn btn-primary">Run Pipeline</button>
+    </div>
+  </form>
+</div>
+{% endblock %}